文章预览
看到了一个超详细的对T细胞亚群进行分析的文献,分享给大家!参考文献标题: 《Integrated single-cell transcriptome and T cell receptor profiling reveals defects of T cell exhaustion in pulmonary tuberculosis》, 这篇文献于2024年6月发表在 J Infect. 杂志(IF=14.3)上。 下面几张图来自文献: 整理后的: note:下面这两张图来自小红书 按照CD4/CD8/其他T分别分类: R代码版:用的时候可能需要稍微修改一下 ############################### # 创建一个空的list对象 cell_markers # CD4+ T细胞亚群 cell_markers$`Naive T cells` "CCR7" , "SELL" , "TCF7" , "IL7R" , "GPR183" , "LEF1" , "LTB" ) cell_markers$`Central Memory T cells` "CCR7" , "HSPA6" , "MT1E" , "MT1F" , "CLDND1" , "CD69" , "GPR183" , "IL7R" , "KLF2" , "TOB1" ) cell_markers$`Effector Memory T cells` "RPS19" , "DUSP2" , "CD44" ) cell_markers$`Th1-like T cells` "UCP2" , "APCB1B" , "TBX21" , "IFNG"
………………………………